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Cerium in PDB 9c8y: X-Ray Crystal Structure of Methylorubrum Extorquens Ce(III)-Bound Land

Protein crystallography data

The structure of X-Ray Crystal Structure of Methylorubrum Extorquens Ce(III)-Bound Land, PDB code: 9c8y was solved by J.J.Jung, C.-Y.Lin, A.K.Boal, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 31.88 / 1.80
Space group I 21 3
Cell size a, b, c (Å), α, β, γ (°) 78.086, 78.086, 78.086, 90, 90, 90
R / Rfree (%) 18.8 / 24.7

Cerium Binding Sites:

The binding sites of Cerium atom in the X-Ray Crystal Structure of Methylorubrum Extorquens Ce(III)-Bound Land (pdb code 9c8y). This binding sites where shown within 5.0 Angstroms radius around Cerium atom.
In total only one binding site of Cerium was determined in the X-Ray Crystal Structure of Methylorubrum Extorquens Ce(III)-Bound Land, PDB code: 9c8y:

Cerium binding site 1 out of 1 in 9c8y

Go back to Cerium Binding Sites List in 9c8y
Cerium binding site 1 out of 1 in the X-Ray Crystal Structure of Methylorubrum Extorquens Ce(III)-Bound Land


Mono view


Stereo pair view

A full contact list of Cerium with other atoms in the Ce binding site number 1 of X-Ray Crystal Structure of Methylorubrum Extorquens Ce(III)-Bound Land within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ce101

b:15.8
occ:0.50
OE1 A:GLU73 2.5 16.9 1.0
OE2 A:GLU75 2.6 18.9 1.0
OE1 A:GLU70 2.6 16.0 1.0
O A:HOH203 2.6 26.8 0.3
OE2 A:GLU70 2.8 15.0 1.0
CD A:GLU70 3.0 14.8 1.0
CD A:GLU75 3.6 18.5 1.0
CD A:GLU73 3.7 15.3 1.0
OE2 A:GLU73 4.2 20.0 1.0
OE1 A:GLU75 4.3 31.5 1.0
CG A:GLU75 4.5 21.9 1.0
CG A:GLU70 4.5 11.8 1.0
NH2 A:ARG69 4.8 16.8 1.0
NE A:ARG69 4.9 14.7 1.0
CG A:GLU73 4.9 13.2 1.0
CB A:GLU73 4.9 15.7 1.0
OE1 A:GLU78 5.0 20.9 0.4

Reference:

W.B.Larrinaga, J.J.Jung, C.-Y.Lin, A.K.Boal, J.A.Cotruvo. Modulating Metal-Centered Dimerization of A Lanthanide Chaperone Protein For Separation of Light Lanthanides To Be Published.
Page generated: Thu Oct 31 17:29:55 2024

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