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    PDB 1ak8-1n65
      1ak8
      1fck
      1n65

Cerium in the structure of Structure of Diceric Human Lactoferrin (pdb 1fck)






The binding sites of Cerium atom in the structure of Structure of Diceric Human Lactoferrin (pdb code 1fck). This binding sites where shown with 5.0 Angstroms radius around Cerium atom.
The 1fck structure was solved by H.M.BAKER, C.J.BAKER, C.A.SMITH, E.N.BAKER, with X-Ray Crystallography technique, brief refinement statistics is given in the table below:
Resolution (A)2.2
Space groupP212121
a (A)154.900
b (A)97.100
c (A)56.000
alpha (°)90.00
beta (°)90.00
gamma (°)90.00
Rfactor (%)20.3
Rfree (%)25.7


Cerium Binding Sites:

Cerium binding site 1 out of 2 in 1fck


Cerium binding site 1 out of 2 in 1fck
Click to enlarge
stereopicture of Cerium binding site 1 out of 2 in 1fck
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Cerium in the PDB 1fck. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Cerium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Asp60, A: Gly61, A: Tyr92, A: Arg121, A: Thr122, A: Ala123, A: Tyr192, A: Arg210, A: His253, A: Co3695, A: Hoh700,

conact list:


AtomAtomDistance (A)
CeCB A:Asp603.95
CeOD2 A:Asp604.45
CeOD1 A:Asp602.52
CeCG A:Asp603.46
CeCA A:Asp604.55
CeN A:Gly614.92
CeCE2 A:Tyr923.75
CeCD2 A:Tyr925.00
CeCZ A:Tyr923.19
CeCE1 A:Tyr924.12
CeOH A:Tyr922.32
CeNH2 A:Arg1214.71
CeN A:Thr1224.85
CeCB A:Thr1224.29
CeOG1 A:Thr1224.51
CeN A:Ala1234.73
CeCE2 A:Tyr1924.35
CeCZ A:Tyr1923.34
CeCE1 A:Tyr1923.92
CeOH A:Tyr1922.24
CeNH2 A:Arg2104.13
CeNE2 A:His2532.55
CeND1 A:His2534.68
CeCD2 A:His2533.32
CeCE1 A:His2533.64
CeCG A:His2534.56
CeO1 A:Co36954.26
CeO2 A:Co36952.57
CeC A:Co36953.00
CeO3 A:Co36952.65
CeO A:Hoh7003.79

interactive model:


Cerium binding site 2 out of 2 in 1fck


Cerium binding site 2 out of 2 in 1fck
Click to enlarge
stereopicture of Cerium binding site 2 out of 2 in 1fck
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 2 of Cerium in the PDB 1fck. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Cerium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Asp395, A: Tyr435, A: Arg465, A: Thr466, A: Ala467, A: Tyr528, A: His597, A: Co3696, A: Hoh703, A: Hoh855,

conact list:


AtomAtomDistance (A)
CeCB A:Asp3953.96
CeOD2 A:Asp3953.92
CeOD1 A:Asp3952.31
CeCG A:Asp3953.18
CeCA A:Asp3954.65
CeCE2 A:Tyr4353.59
CeCD2 A:Tyr4354.88
CeCZ A:Tyr4353.22
CeCE1 A:Tyr4354.32
CeOH A:Tyr4352.31
CeNE A:Arg4654.81
CeNH2 A:Arg4654.35
CeN A:Thr4664.70
CeCB A:Thr4664.34
CeOG1 A:Thr4664.62
CeCA A:Thr4664.99
CeN A:Ala4674.54
CeCB A:Ala4674.92
CeCE2 A:Tyr5284.23
CeCZ A:Tyr5283.21
CeCE1 A:Tyr5283.74
CeOH A:Tyr5282.21
CeNE2 A:His5972.81
CeND1 A:His5974.92
CeCD2 A:His5973.61
CeCE1 A:His5973.86
CeCG A:His5974.84
CeO1 A:Co36962.46
CeO2 A:Co36962.59
CeC A:Co36962.86
CeO3 A:Co36964.11
CeO A:Hoh7033.84
CeO A:Hoh8554.16

interactive model:




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